Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.55■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Gm25262-201ENSMUST00000174934 133 ntBASIC20.52■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.52■□□□□ 0.88
Trav15-2-dv6-2A0A075B650 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.5■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.5■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.49■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.47■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15-2-dv6-2A0A075B650 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.44■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.41■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Trav15-2-dv6-2A0A075B650 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.34■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.33■□□□□ 0.85
Trav15-2-dv6-2A0A075B650 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.31■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Gm27322-201ENSMUST00000184007 104 ntBASIC20.3■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav15-2-dv6-2A0A075B650 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.25■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.22■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.21■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav15-2-dv6-2A0A075B650 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms