Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp28Q8CGV8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Gm13238-201ENSMUST00000117655 780 ntBASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp28Q8CGV8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp28Q8CGV8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp28Q8CGV8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp28Q8CGV8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp28Q8CGV8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp28Q8CGV8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Mmp28Q8CGV8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp28Q8CGV8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms