Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrif1Q8CDD9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrif1Q8CDD9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrif1Q8CDD9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Golgb1-201ENSMUST00000023534 498 ntBASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrif1Q8CDD9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrif1Q8CDD9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lrif1Q8CDD9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lrif1Q8CDD9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrif1Q8CDD9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrif1Q8CDD9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrif1Q8CDD9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrif1Q8CDD9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lrif1Q8CDD9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrif1Q8CDD9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lrif1Q8CDD9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lrif1Q8CDD9 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.89■□□□□ 0.62
Lrif1Q8CDD9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lrif1Q8CDD9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrif1Q8CDD9 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.89■□□□□ 0.61
Lrif1Q8CDD9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms