Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxd8P23463 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxd8P23463 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxd8P23463 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Hoxd8P23463 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.01■□□□□ 0.79
Hoxd8P23463 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Hoxd8P23463 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxd8P23463 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxd8P23463 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxd8P23463 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.01■□□□□ 0.79
Hoxd8P23463 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxd8P23463 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxd8P23463 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxd8P23463 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Hoxd8P23463 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20■□□□□ 0.79
Hoxd8P23463 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20■□□□□ 0.79
Hoxd8P23463 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20■□□□□ 0.79
Hoxd8P23463 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Hoxd8P23463 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20■□□□□ 0.79
Hoxd8P23463 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 Rab3c-203ENSMUST00000224180 967 ntBASIC20■□□□□ 0.79
Hoxd8P23463 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 Gm37563-201ENSMUST00000192580 1513 ntBASIC20■□□□□ 0.79
Hoxd8P23463 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20■□□□□ 0.79
Hoxd8P23463 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxd8P23463 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.99■□□□□ 0.79
Hoxd8P23463 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxd8P23463 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hoxd8P23463 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.98■□□□□ 0.79
Hoxd8P23463 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxd8P23463 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hoxd8P23463 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.98■□□□□ 0.79
Hoxd8P23463 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxd8P23463 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Hoxd8P23463 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxd8P23463 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxd8P23463 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxd8P23463 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxd8P23463 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxd8P23463 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Hoxd8P23463 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxd8P23463 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Hoxd8P23463 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Hoxd8P23463 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.97■□□□□ 0.79
Hoxd8P23463 Gm8520-201ENSMUST00000186517 868 ntBASIC19.97■□□□□ 0.79
Hoxd8P23463 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.97■□□□□ 0.79
Hoxd8P23463 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.97■□□□□ 0.79
Hoxd8P23463 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxd8P23463 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxd8P23463 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Hoxd8P23463 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxd8P23463 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxd8P23463 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxd8P23463 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.96■□□□□ 0.79
Hoxd8P23463 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hoxd8P23463 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxd8P23463 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.96■□□□□ 0.79
Hoxd8P23463 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxd8P23463 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxd8P23463 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxd8P23463 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxd8P23463 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hoxd8P23463 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.95■□□□□ 0.78
Hoxd8P23463 Gm22240-201ENSMUST00000175225 82 ntBASIC19.95■□□□□ 0.78
Hoxd8P23463 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hoxd8P23463 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hoxd8P23463 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxd8P23463 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxd8P23463 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxd8P23463 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxd8P23463 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxd8P23463 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxd8P23463 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxd8P23463 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.94■□□□□ 0.78
Hoxd8P23463 Gm37856-201ENSMUST00000191634 999 ntBASIC19.94■□□□□ 0.78
Hoxd8P23463 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxd8P23463 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxd8P23463 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxd8P23463 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxd8P23463 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxd8P23463 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxd8P23463 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxd8P23463 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxd8P23463 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms