Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col9a3A2ACT7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col9a3A2ACT7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col9a3A2ACT7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col9a3A2ACT7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Col9a3A2ACT7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Gm27275-201ENSMUST00000184318 272 ntBASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Rab3c-203ENSMUST00000224180 967 ntBASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col9a3A2ACT7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col9a3A2ACT7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col9a3A2ACT7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col9a3A2ACT7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col9a3A2ACT7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.85■□□□□ 0.61
Col9a3A2ACT7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.85■□□□□ 0.61
Col9a3A2ACT7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Col9a3A2ACT7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col9a3A2ACT7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col9a3A2ACT7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.85■□□□□ 0.61
Col9a3A2ACT7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col9a3A2ACT7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col9a3A2ACT7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col9a3A2ACT7 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.84■□□□□ 0.61
Col9a3A2ACT7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col9a3A2ACT7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col9a3A2ACT7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Col9a3A2ACT7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col9a3A2ACT7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col9a3A2ACT7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col9a3A2ACT7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col9a3A2ACT7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col9a3A2ACT7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col9a3A2ACT7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col9a3A2ACT7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.83■□□□□ 0.6
Col9a3A2ACT7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col9a3A2ACT7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col9a3A2ACT7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col9a3A2ACT7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col9a3A2ACT7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col9a3A2ACT7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Col9a3A2ACT7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col9a3A2ACT7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col9a3A2ACT7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col9a3A2ACT7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col9a3A2ACT7 Mir6982-201ENSMUST00000184354 68 ntBASIC18.82■□□□□ 0.6
Col9a3A2ACT7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col9a3A2ACT7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col9a3A2ACT7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Col9a3A2ACT7 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Gm12896-201ENSMUST00000118430 226 ntBASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col9a3A2ACT7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col9a3A2ACT7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.79■□□□□ 0.6
Col9a3A2ACT7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col9a3A2ACT7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Col9a3A2ACT7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col9a3A2ACT7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col9a3A2ACT7 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.79■□□□□ 0.6
Col9a3A2ACT7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col9a3A2ACT7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col9a3A2ACT7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col9a3A2ACT7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col9a3A2ACT7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Col9a3A2ACT7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Col9a3A2ACT7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Col9a3A2ACT7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col9a3A2ACT7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col9a3A2ACT7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col9a3A2ACT7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Col9a3A2ACT7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.77■□□□□ 0.6
Col9a3A2ACT7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms