Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.64■□□□□ 0.74
4933424G06RikA0A140LIP3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
4933424G06RikA0A140LIP3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
4933424G06RikA0A140LIP3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
4933424G06RikA0A140LIP3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
4933424G06RikA0A140LIP3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
4933424G06RikA0A140LIP3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Gm13146-201ENSMUST00000118508 780 ntBASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
4933424G06RikA0A140LIP3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
4933424G06RikA0A140LIP3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
4933424G06RikA0A140LIP3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
4933424G06RikA0A140LIP3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
4933424G06RikA0A140LIP3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
4933424G06RikA0A140LIP3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
4933424G06RikA0A140LIP3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.59■□□□□ 0.73
4933424G06RikA0A140LIP3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
4933424G06RikA0A140LIP3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
4933424G06RikA0A140LIP3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
4933424G06RikA0A140LIP3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
4933424G06RikA0A140LIP3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
4933424G06RikA0A140LIP3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.58■□□□□ 0.72
4933424G06RikA0A140LIP3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
4933424G06RikA0A140LIP3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
4933424G06RikA0A140LIP3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
4933424G06RikA0A140LIP3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
4933424G06RikA0A140LIP3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
4933424G06RikA0A140LIP3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
4933424G06RikA0A140LIP3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
4933424G06RikA0A140LIP3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
4933424G06RikA0A140LIP3 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.56■□□□□ 0.72
4933424G06RikA0A140LIP3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
4933424G06RikA0A140LIP3 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.56■□□□□ 0.72
4933424G06RikA0A140LIP3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
4933424G06RikA0A140LIP3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
4933424G06RikA0A140LIP3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms