Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Gm43060-201ENSMUST00000200621 289 ntBASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv30A0A0B4J1P1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv30A0A0B4J1P1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trbv30A0A0B4J1P1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv30A0A0B4J1P1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv30A0A0B4J1P1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv30A0A0B4J1P1 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.47□□□□□ -0.09
Trbv30A0A0B4J1P1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv30A0A0B4J1P1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv30A0A0B4J1P1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trbv30A0A0B4J1P1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trbv30A0A0B4J1P1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trbv30A0A0B4J1P1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv30A0A0B4J1P1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv30A0A0B4J1P1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv30A0A0B4J1P1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv30A0A0B4J1P1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 Gm27801-201ENSMUST00000184174 223 ntBASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv30A0A0B4J1P1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv30A0A0B4J1P1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv30A0A0B4J1P1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv30A0A0B4J1P1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trbv30A0A0B4J1P1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trbv30A0A0B4J1P1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv30A0A0B4J1P1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Trbv30A0A0B4J1P1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms