Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.27□□□□□ -0.12
Ighv1-23A0A0A6YVW3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.27□□□□□ -0.12
Ighv1-23A0A0A6YVW3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rps24-207ENSMUST00000224568 714 ntBASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ighv1-23A0A0A6YVW3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms