Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-5A0A075B621 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Gm10399-202ENSMUST00000202768 748 ntBASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-5A0A075B621 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 AA386476-201ENSMUST00000098781 1665 ntBASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-5A0A075B621 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-5A0A075B621 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-5A0A075B621 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trav6n-5A0A075B621 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms