Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.18■□□□□ 0.34
Cldn13Q9Z0S4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn13Q9Z0S4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Cldn13Q9Z0S4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn13Q9Z0S4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.17■□□□□ 0.34
Cldn13Q9Z0S4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.17■□□□□ 0.34
Cldn13Q9Z0S4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn13Q9Z0S4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn13Q9Z0S4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn13Q9Z0S4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn13Q9Z0S4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn13Q9Z0S4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn13Q9Z0S4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cldn13Q9Z0S4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn13Q9Z0S4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn13Q9Z0S4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn13Q9Z0S4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.16■□□□□ 0.34
Cldn13Q9Z0S4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn13Q9Z0S4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn13Q9Z0S4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn13Q9Z0S4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn13Q9Z0S4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn13Q9Z0S4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Smad6-203ENSMUST00000179458 273 ntBASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Gm26833-201ENSMUST00000180899 440 ntBASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Cldn13Q9Z0S4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn13Q9Z0S4 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms