Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.04■□□□□ 0.64
Trim33Q99PP7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim33Q99PP7 AA386476-201ENSMUST00000098781 1665 ntBASIC19.04■□□□□ 0.64
Trim33Q99PP7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim33Q99PP7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim33Q99PP7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim33Q99PP7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim33Q99PP7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim33Q99PP7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim33Q99PP7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim33Q99PP7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim33Q99PP7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim33Q99PP7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim33Q99PP7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim33Q99PP7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim33Q99PP7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim33Q99PP7 Gm26833-201ENSMUST00000180899 440 ntBASIC19.01■□□□□ 0.63
Trim33Q99PP7 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.01■□□□□ 0.63
Trim33Q99PP7 Serp2-204ENSMUST00000228055 705 ntBASIC19.01■□□□□ 0.63
Trim33Q99PP7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim33Q99PP7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim33Q99PP7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim33Q99PP7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Gm43182-201ENSMUST00000199476 2528 ntBASIC19■□□□□ 0.63
Trim33Q99PP7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19■□□□□ 0.63
Trim33Q99PP7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim33Q99PP7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim33Q99PP7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim33Q99PP7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim33Q99PP7 Gm11421-201ENSMUST00000122124 294 ntBASIC18.99■□□□□ 0.63
Trim33Q99PP7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim33Q99PP7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim33Q99PP7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim33Q99PP7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.98■□□□□ 0.63
Trim33Q99PP7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim33Q99PP7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Gm40848-201ENSMUST00000221998 324 ntBASIC18.97■□□□□ 0.63
Trim33Q99PP7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.97■□□□□ 0.63
Trim33Q99PP7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim33Q99PP7 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.97■□□□□ 0.63
Trim33Q99PP7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.96■□□□□ 0.63
Trim33Q99PP7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim33Q99PP7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms