Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Golgb1-201ENSMUST00000023534 498 ntBASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cdk5rap3Q99LM2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cdk5rap3Q99LM2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap3Q99LM2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap3Q99LM2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cdk5rap3Q99LM2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cdk5rap3Q99LM2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk5rap3Q99LM2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cdk5rap3Q99LM2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Cdk5rap3Q99LM2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk5rap3Q99LM2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap3Q99LM2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Serp2-204ENSMUST00000228055 705 ntBASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.87■□□□□ 0.77
Cdk5rap3Q99LM2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms