Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Rps24-207ENSMUST00000224568 714 ntBASIC19.91■□□□□ 0.78
Trim60Q8VI40 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.91■□□□□ 0.78
Trim60Q8VI40 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim60Q8VI40 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trim60Q8VI40 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim60Q8VI40 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim60Q8VI40 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim60Q8VI40 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim60Q8VI40 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim60Q8VI40 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim60Q8VI40 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.9■□□□□ 0.78
Trim60Q8VI40 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim60Q8VI40 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim60Q8VI40 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim60Q8VI40 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim60Q8VI40 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim60Q8VI40 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.89■□□□□ 0.77
Trim60Q8VI40 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim60Q8VI40 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim60Q8VI40 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.89■□□□□ 0.77
Trim60Q8VI40 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim60Q8VI40 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Trim60Q8VI40 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim60Q8VI40 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim60Q8VI40 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim60Q8VI40 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim60Q8VI40 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim60Q8VI40 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim60Q8VI40 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim60Q8VI40 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim60Q8VI40 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim60Q8VI40 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim60Q8VI40 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Trim60Q8VI40 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim60Q8VI40 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Trim60Q8VI40 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trim60Q8VI40 Gm14117-201ENSMUST00000122417 843 ntBASIC19.87■□□□□ 0.77
Trim60Q8VI40 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim60Q8VI40 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim60Q8VI40 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.86■□□□□ 0.77
Trim60Q8VI40 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim60Q8VI40 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim60Q8VI40 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Golgb1-201ENSMUST00000023534 498 ntBASIC19.85■□□□□ 0.77
Trim60Q8VI40 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim60Q8VI40 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.84■□□□□ 0.77
Trim60Q8VI40 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Gm12922-201ENSMUST00000120626 809 ntBASIC19.84■□□□□ 0.77
Trim60Q8VI40 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim60Q8VI40 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim60Q8VI40 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.84■□□□□ 0.77
Trim60Q8VI40 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Trim60Q8VI40 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms