Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VcanQ62059 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VcanQ62059 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.39■□□□□ 0.53
VcanQ62059 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VcanQ62059 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.38■□□□□ 0.53
VcanQ62059 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VcanQ62059 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.38■□□□□ 0.53
VcanQ62059 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VcanQ62059 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VcanQ62059 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VcanQ62059 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VcanQ62059 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VcanQ62059 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.38■□□□□ 0.53
VcanQ62059 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
VcanQ62059 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VcanQ62059 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VcanQ62059 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.38■□□□□ 0.53
VcanQ62059 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VcanQ62059 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VcanQ62059 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VcanQ62059 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VcanQ62059 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VcanQ62059 Rab3c-203ENSMUST00000224180 967 ntBASIC18.36■□□□□ 0.53
VcanQ62059 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.36■□□□□ 0.53
VcanQ62059 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VcanQ62059 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VcanQ62059 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
VcanQ62059 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VcanQ62059 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VcanQ62059 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.35■□□□□ 0.53
VcanQ62059 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VcanQ62059 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VcanQ62059 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VcanQ62059 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VcanQ62059 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.35■□□□□ 0.53
VcanQ62059 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VcanQ62059 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VcanQ62059 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VcanQ62059 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VcanQ62059 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VcanQ62059 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VcanQ62059 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.34■□□□□ 0.53
VcanQ62059 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VcanQ62059 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VcanQ62059 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
VcanQ62059 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VcanQ62059 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.34■□□□□ 0.53
VcanQ62059 Gm38205-201ENSMUST00000192243 258 ntBASIC18.34■□□□□ 0.53
VcanQ62059 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.34■□□□□ 0.53
VcanQ62059 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.34■□□□□ 0.53
VcanQ62059 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VcanQ62059 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.33■□□□□ 0.53
VcanQ62059 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VcanQ62059 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VcanQ62059 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VcanQ62059 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VcanQ62059 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.33■□□□□ 0.52
VcanQ62059 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VcanQ62059 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
VcanQ62059 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
VcanQ62059 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VcanQ62059 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.32■□□□□ 0.52
VcanQ62059 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VcanQ62059 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
VcanQ62059 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VcanQ62059 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
VcanQ62059 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VcanQ62059 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VcanQ62059 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VcanQ62059 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VcanQ62059 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VcanQ62059 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VcanQ62059 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VcanQ62059 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VcanQ62059 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
VcanQ62059 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VcanQ62059 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
VcanQ62059 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VcanQ62059 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.31■□□□□ 0.52
VcanQ62059 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VcanQ62059 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VcanQ62059 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
VcanQ62059 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VcanQ62059 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.31■□□□□ 0.52
VcanQ62059 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VcanQ62059 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VcanQ62059 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.31■□□□□ 0.52
VcanQ62059 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.31■□□□□ 0.52
VcanQ62059 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VcanQ62059 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.31■□□□□ 0.52
VcanQ62059 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VcanQ62059 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.3■□□□□ 0.52
VcanQ62059 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VcanQ62059 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VcanQ62059 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VcanQ62059 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VcanQ62059 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.3■□□□□ 0.52
VcanQ62059 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VcanQ62059 Dio3-201ENSMUST00000097228 1449 ntBASIC18.3■□□□□ 0.52
VcanQ62059 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms