Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.84■□□□□ 0.45
Cacna1aP97445 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cacna1aP97445 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 Gm15565-201ENSMUST00000118890 427 ntBASIC17.84■□□□□ 0.45
Cacna1aP97445 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1aP97445 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1aP97445 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.83■□□□□ 0.45
Cacna1aP97445 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1aP97445 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1aP97445 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cacna1aP97445 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cacna1aP97445 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Cacna1aP97445 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1aP97445 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cacna1aP97445 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.83■□□□□ 0.44
Cacna1aP97445 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1aP97445 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cacna1aP97445 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.82■□□□□ 0.44
Cacna1aP97445 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1aP97445 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cacna1aP97445 Gm27741-201ENSMUST00000185060 237 ntBASIC17.81■□□□□ 0.44
Cacna1aP97445 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1aP97445 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1aP97445 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.81■□□□□ 0.44
Cacna1aP97445 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1aP97445 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1aP97445 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1aP97445 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1aP97445 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.8■□□□□ 0.44
Cacna1aP97445 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1aP97445 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1aP97445 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.8■□□□□ 0.44
Cacna1aP97445 Gm27275-201ENSMUST00000184318 272 ntBASIC17.8■□□□□ 0.44
Cacna1aP97445 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1aP97445 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
Cacna1aP97445 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1aP97445 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cacna1aP97445 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.79■□□□□ 0.44
Cacna1aP97445 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.79■□□□□ 0.44
Cacna1aP97445 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Cacna1aP97445 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cacna1aP97445 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cacna1aP97445 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cacna1aP97445 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cacna1aP97445 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1aP97445 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1aP97445 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1aP97445 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1aP97445 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cacna1aP97445 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1aP97445 Gm11643-201ENSMUST00000119578 864 ntBASIC17.78■□□□□ 0.44
Cacna1aP97445 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1aP97445 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1aP97445 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1aP97445 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1aP97445 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1aP97445 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cacna1aP97445 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1aP97445 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cacna1aP97445 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1aP97445 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1aP97445 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cacna1aP97445 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.77■□□□□ 0.43
Cacna1aP97445 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1aP97445 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cacna1aP97445 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1aP97445 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.76■□□□□ 0.43
Cacna1aP97445 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1aP97445 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1aP97445 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms