Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpm3P21107 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpm3P21107 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpm3P21107 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.6■■□□□ 1.05
Tpm3P21107 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Tpm3P21107 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpm3P21107 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
Tpm3P21107 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpm3P21107 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tpm3P21107 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpm3P21107 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Tpm3P21107 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tpm3P21107 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tpm3P21107 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.59■■□□□ 1.05
Tpm3P21107 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Tpm3P21107 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tpm3P21107 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tpm3P21107 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Tpm3P21107 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpm3P21107 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpm3P21107 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpm3P21107 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpm3P21107 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
Tpm3P21107 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpm3P21107 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpm3P21107 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpm3P21107 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tpm3P21107 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.58■■□□□ 1.05
Tpm3P21107 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.58■■□□□ 1.05
Tpm3P21107 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpm3P21107 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.58■■□□□ 1.04
Tpm3P21107 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tpm3P21107 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tpm3P21107 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.58■■□□□ 1.04
Tpm3P21107 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.58■■□□□ 1.04
Tpm3P21107 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Tpm3P21107 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.57■■□□□ 1.04
Tpm3P21107 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.57■■□□□ 1.04
Tpm3P21107 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.57■■□□□ 1.04
Tpm3P21107 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Tpm3P21107 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpm3P21107 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpm3P21107 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpm3P21107 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpm3P21107 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Tpm3P21107 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Tpm3P21107 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpm3P21107 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpm3P21107 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tpm3P21107 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.56■■□□□ 1.04
Tpm3P21107 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.56■■□□□ 1.04
Tpm3P21107 Mir6236-201ENSMUST00000184437 123 ntBASIC21.56■■□□□ 1.04
Tpm3P21107 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Tpm3P21107 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Tpm3P21107 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpm3P21107 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpm3P21107 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpm3P21107 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Tpm3P21107 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Tpm3P21107 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm3P21107 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm3P21107 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm3P21107 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm3P21107 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm3P21107 Mir6538-201ENSMUST00000183713 110 ntBASIC21.55■■□□□ 1.04
Tpm3P21107 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Tpm3P21107 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Tpm3P21107 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Tpm3P21107 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm3P21107 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpm3P21107 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.55■■□□□ 1.04
Tpm3P21107 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.54■■□□□ 1.04
Tpm3P21107 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm3P21107 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Tpm3P21107 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Tpm3P21107 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm3P21107 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm3P21107 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Tpm3P21107 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm3P21107 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.54■■□□□ 1.04
Tpm3P21107 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tpm3P21107 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms