Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
NclP09405 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
NclP09405 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
NclP09405 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
NclP09405 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
NclP09405 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
NclP09405 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
NclP09405 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NclP09405 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NclP09405 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
NclP09405 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
NclP09405 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC28.64■■■□□ 2.18
NclP09405 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC28.64■■■□□ 2.18
NclP09405 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC28.64■■■□□ 2.18
NclP09405 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
NclP09405 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
NclP09405 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
NclP09405 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC28.63■■■□□ 2.17
NclP09405 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NclP09405 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NclP09405 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NclP09405 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NclP09405 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC28.63■■■□□ 2.17
NclP09405 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NclP09405 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NclP09405 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NclP09405 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
NclP09405 CT010467.1-202ENSMUST00000205406 714 ntBASIC28.62■■■□□ 2.17
NclP09405 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NclP09405 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC28.62■■■□□ 2.17
NclP09405 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC28.62■■■□□ 2.17
NclP09405 Gm6802-201ENSMUST00000167843 1983 ntBASIC28.62■■■□□ 2.17
NclP09405 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NclP09405 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
NclP09405 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
NclP09405 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
NclP09405 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
NclP09405 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
NclP09405 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
NclP09405 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NclP09405 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NclP09405 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC28.6■■■□□ 2.17
NclP09405 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
NclP09405 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NclP09405 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NclP09405 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC28.6■■■□□ 2.17
NclP09405 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NclP09405 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NclP09405 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
NclP09405 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC28.59■■■□□ 2.17
NclP09405 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NclP09405 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC28.59■■■□□ 2.17
NclP09405 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
NclP09405 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC28.59■■■□□ 2.17
NclP09405 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC28.59■■■□□ 2.17
NclP09405 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC28.59■■■□□ 2.17
NclP09405 CT025689.6-201ENSMUST00000224991 1104 ntBASIC28.59■■■□□ 2.17
NclP09405 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
NclP09405 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NclP09405 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
NclP09405 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
NclP09405 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC28.58■■■□□ 2.17
NclP09405 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
NclP09405 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC28.58■■■□□ 2.17
NclP09405 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
NclP09405 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
NclP09405 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC28.58■■■□□ 2.17
NclP09405 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
NclP09405 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
NclP09405 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
NclP09405 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
NclP09405 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NclP09405 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
NclP09405 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
NclP09405 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NclP09405 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
NclP09405 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
NclP09405 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NclP09405 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NclP09405 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
NclP09405 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
NclP09405 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
NclP09405 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC28.56■■■□□ 2.16
NclP09405 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
NclP09405 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
NclP09405 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC28.55■■■□□ 2.16
NclP09405 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
NclP09405 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
NclP09405 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
NclP09405 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
NclP09405 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
NclP09405 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
NclP09405 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
NclP09405 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC28.55■■■□□ 2.16
NclP09405 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NclP09405 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
NclP09405 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
NclP09405 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NclP09405 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NclP09405 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms