Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Herc1E9PZP8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Herc1E9PZP8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc1E9PZP8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.08□□□□□ -0.64
Herc1E9PZP8 Mzt1-203ENSMUST00000227948 952 ntBASIC11.08□□□□□ -0.64
Herc1E9PZP8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc1E9PZP8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.07□□□□□ -0.64
Herc1E9PZP8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Gm18032-201ENSMUST00000222541 538 ntBASIC11.07□□□□□ -0.64
Herc1E9PZP8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.07□□□□□ -0.64
Herc1E9PZP8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Herc1E9PZP8 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.06□□□□□ -0.64
Herc1E9PZP8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC11.06□□□□□ -0.64
Herc1E9PZP8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc1E9PZP8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.06□□□□□ -0.64
Herc1E9PZP8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Gm6623-201ENSMUST00000173570 544 ntBASIC11.05□□□□□ -0.64
Herc1E9PZP8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.05□□□□□ -0.64
Herc1E9PZP8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Herc1E9PZP8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc1E9PZP8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Gm18669-201ENSMUST00000216049 778 ntBASIC11.04□□□□□ -0.64
Herc1E9PZP8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Gm27525-201ENSMUST00000184465 107 ntBASIC11.04□□□□□ -0.64
Herc1E9PZP8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Herc1E9PZP8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.03□□□□□ -0.64
Herc1E9PZP8 Gm24589-201ENSMUST00000116692 94 ntBASIC11.03□□□□□ -0.64
Herc1E9PZP8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms