Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
H2afb1S4R1E0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb1S4R1E0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.47■□□□□ 0.39
H2afb1S4R1E0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.47■□□□□ 0.39
H2afb1S4R1E0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb1S4R1E0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.46■□□□□ 0.39
H2afb1S4R1E0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
H2afb1S4R1E0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb1S4R1E0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.46■□□□□ 0.39
H2afb1S4R1E0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb1S4R1E0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.46■□□□□ 0.39
H2afb1S4R1E0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb1S4R1E0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb1S4R1E0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
H2afb1S4R1E0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb1S4R1E0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Rps24-207ENSMUST00000224568 714 ntBASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms