Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim33Q99PP7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim33Q99PP7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim33Q99PP7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim33Q99PP7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.12■□□□□ 0.65
Trim33Q99PP7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.12■□□□□ 0.65
Trim33Q99PP7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim33Q99PP7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim33Q99PP7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim33Q99PP7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim33Q99PP7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Gm43017-201ENSMUST00000198296 752 ntBASIC19.11■□□□□ 0.65
Trim33Q99PP7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim33Q99PP7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim33Q99PP7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim33Q99PP7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim33Q99PP7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.1■□□□□ 0.65
Trim33Q99PP7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim33Q99PP7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim33Q99PP7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim33Q99PP7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.09■□□□□ 0.65
Trim33Q99PP7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim33Q99PP7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trim33Q99PP7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim33Q99PP7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim33Q99PP7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim33Q99PP7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim33Q99PP7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trim33Q99PP7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim33Q99PP7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.08■□□□□ 0.64
Trim33Q99PP7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim33Q99PP7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim33Q99PP7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim33Q99PP7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim33Q99PP7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim33Q99PP7 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.08■□□□□ 0.64
Trim33Q99PP7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim33Q99PP7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.08■□□□□ 0.64
Trim33Q99PP7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim33Q99PP7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim33Q99PP7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Trim33Q99PP7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim33Q99PP7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Trim33Q99PP7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim33Q99PP7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim33Q99PP7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim33Q99PP7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim33Q99PP7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Smad6-203ENSMUST00000179458 273 ntBASIC19.06■□□□□ 0.64
Trim33Q99PP7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim33Q99PP7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim33Q99PP7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim33Q99PP7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.05■□□□□ 0.64
Trim33Q99PP7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim33Q99PP7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms