Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Gm7290-201ENSMUST00000104990 617 ntBASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Gm12918-201ENSMUST00000120234 636 ntBASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Gm15710-201ENSMUST00000121821 636 ntBASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Gm5075-201ENSMUST00000196916 622 ntBASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc44a4Q91VA1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23■■□□□ 1.27
Slc44a4Q91VA1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc44a4Q91VA1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23■■□□□ 1.27
Slc44a4Q91VA1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Slc44a4Q91VA1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc44a4Q91VA1 Gm5408-201ENSMUST00000197998 747 ntBASIC23■■□□□ 1.27
Slc44a4Q91VA1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc44a4Q91VA1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23■■□□□ 1.27
Slc44a4Q91VA1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Slc44a4Q91VA1 Gm7860-201ENSMUST00000121190 879 ntBASIC22.99■■□□□ 1.27
Slc44a4Q91VA1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Slc44a4Q91VA1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.99■■□□□ 1.27
Slc44a4Q91VA1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc44a4Q91VA1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc44a4Q91VA1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc44a4Q91VA1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc44a4Q91VA1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Gm6211-202ENSMUST00000167849 925 ntBASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc44a4Q91VA1 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.97■■□□□ 1.27
Slc44a4Q91VA1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Slc44a4Q91VA1 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.97■■□□□ 1.27
Slc44a4Q91VA1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Slc44a4Q91VA1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Slc44a4Q91VA1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.96■■□□□ 1.27
Slc44a4Q91VA1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.96■■□□□ 1.27
Slc44a4Q91VA1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Slc44a4Q91VA1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Slc44a4Q91VA1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Slc44a4Q91VA1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC22.96■■□□□ 1.27
Slc44a4Q91VA1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Slc44a4Q91VA1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Slc44a4Q91VA1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Slc44a4Q91VA1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Slc44a4Q91VA1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Slc44a4Q91VA1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Slc44a4Q91VA1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Slc44a4Q91VA1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Slc44a4Q91VA1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Slc44a4Q91VA1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Slc44a4Q91VA1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.94■■□□□ 1.26
Slc44a4Q91VA1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slc44a4Q91VA1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Slc44a4Q91VA1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Slc44a4Q91VA1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slc44a4Q91VA1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slc44a4Q91VA1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Slc44a4Q91VA1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Gm20049-201ENSMUST00000219950 730 ntBASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Slc44a4Q91VA1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Slc44a4Q91VA1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Slc44a4Q91VA1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Slc44a4Q91VA1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Slc44a4Q91VA1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Slc44a4Q91VA1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Slc44a4Q91VA1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Slc44a4Q91VA1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Slc44a4Q91VA1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Slc44a4Q91VA1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Slc44a4Q91VA1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms