Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp28Q8CGV8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp28Q8CGV8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp28Q8CGV8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.48■□□□□ 0.23
Mmp28Q8CGV8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp28Q8CGV8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.48■□□□□ 0.23
Mmp28Q8CGV8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.48■□□□□ 0.23
Mmp28Q8CGV8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.48■□□□□ 0.23
Mmp28Q8CGV8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp28Q8CGV8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp28Q8CGV8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp28Q8CGV8 Fst-202ENSMUST00000223640 2612 ntBASIC16.46■□□□□ 0.22
Mmp28Q8CGV8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.45■□□□□ 0.22
Mmp28Q8CGV8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Gm43566-201ENSMUST00000196851 808 ntBASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp28Q8CGV8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms