Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf7Q8BTV2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.35■□□□□ 0.69
Cpsf7Q8BTV2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf7Q8BTV2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf7Q8BTV2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf7Q8BTV2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf7Q8BTV2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.34■□□□□ 0.69
Cpsf7Q8BTV2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cpsf7Q8BTV2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cpsf7Q8BTV2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf7Q8BTV2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf7Q8BTV2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.33■□□□□ 0.69
Cpsf7Q8BTV2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf7Q8BTV2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf7Q8BTV2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf7Q8BTV2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf7Q8BTV2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf7Q8BTV2 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.33■□□□□ 0.68
Cpsf7Q8BTV2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.33■□□□□ 0.68
Cpsf7Q8BTV2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.33■□□□□ 0.68
Cpsf7Q8BTV2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Cpsf7Q8BTV2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Gm40881-201ENSMUST00000223397 166 ntBASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf7Q8BTV2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Gm9870-201ENSMUST00000063874 645 ntBASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf7Q8BTV2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms