Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc6aQ78XR0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trappc6aQ78XR0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trappc6aQ78XR0 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.22■□□□□ 0.67
Trappc6aQ78XR0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Trappc6aQ78XR0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc6aQ78XR0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc6aQ78XR0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trappc6aQ78XR0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Gm13148-201ENSMUST00000118892 745 ntBASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc6aQ78XR0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 AA386476-201ENSMUST00000098781 1665 ntBASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Trappc6aQ78XR0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.19■□□□□ 0.66
Trappc6aQ78XR0 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Gm12527-201ENSMUST00000117967 564 ntBASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trappc6aQ78XR0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Gm8520-201ENSMUST00000186517 868 ntBASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trappc6aQ78XR0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.16■□□□□ 0.66
Trappc6aQ78XR0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trappc6aQ78XR0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trappc6aQ78XR0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trappc6aQ78XR0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trappc6aQ78XR0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.16■□□□□ 0.66
Trappc6aQ78XR0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.16■□□□□ 0.66
Trappc6aQ78XR0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trappc6aQ78XR0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trappc6aQ78XR0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trappc6aQ78XR0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trappc6aQ78XR0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms