Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg2Q6NS82 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg2Q6NS82 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg2Q6NS82 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg2Q6NS82 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg2Q6NS82 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.77■□□□□ 0.92
Retreg2Q6NS82 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Retreg2Q6NS82 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg2Q6NS82 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg2Q6NS82 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg2Q6NS82 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Retreg2Q6NS82 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retreg2Q6NS82 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg2Q6NS82 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg2Q6NS82 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg2Q6NS82 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg2Q6NS82 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg2Q6NS82 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg2Q6NS82 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.75■□□□□ 0.91
Retreg2Q6NS82 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
Retreg2Q6NS82 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg2Q6NS82 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retreg2Q6NS82 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg2Q6NS82 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Gm43060-201ENSMUST00000200621 289 ntBASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.73■□□□□ 0.91
Retreg2Q6NS82 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg2Q6NS82 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg2Q6NS82 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg2Q6NS82 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.71■□□□□ 0.91
Retreg2Q6NS82 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg2Q6NS82 Gm29257-201ENSMUST00000186115 639 ntBASIC20.71■□□□□ 0.91
Retreg2Q6NS82 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.71■□□□□ 0.91
Retreg2Q6NS82 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Retreg2Q6NS82 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg2Q6NS82 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg2Q6NS82 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Retreg2Q6NS82 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg2Q6NS82 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Retreg2Q6NS82 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg2Q6NS82 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg2Q6NS82 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.7■□□□□ 0.9
Retreg2Q6NS82 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg2Q6NS82 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms