Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brf2Q3UAW9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Brf2Q3UAW9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brf2Q3UAW9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brf2Q3UAW9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brf2Q3UAW9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Brf2Q3UAW9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 Spcs1-204ENSMUST00000226782 949 ntBASIC18.21■□□□□ 0.51
Brf2Q3UAW9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Brf2Q3UAW9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Brf2Q3UAW9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Brf2Q3UAW9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brf2Q3UAW9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Brf2Q3UAW9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Brf2Q3UAW9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brf2Q3UAW9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.19■□□□□ 0.5
Brf2Q3UAW9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brf2Q3UAW9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brf2Q3UAW9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.16■□□□□ 0.5
Brf2Q3UAW9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Brf2Q3UAW9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brf2Q3UAW9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brf2Q3UAW9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brf2Q3UAW9 Serp2-204ENSMUST00000228055 705 ntBASIC18.16■□□□□ 0.5
Brf2Q3UAW9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brf2Q3UAW9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Brf2Q3UAW9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Brf2Q3UAW9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brf2Q3UAW9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Brf2Q3UAW9 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.16■□□□□ 0.5
Brf2Q3UAW9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Brf2Q3UAW9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.15■□□□□ 0.5
Brf2Q3UAW9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Brf2Q3UAW9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brf2Q3UAW9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brf2Q3UAW9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Brf2Q3UAW9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Brf2Q3UAW9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.14■□□□□ 0.5
Brf2Q3UAW9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Brf2Q3UAW9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.14■□□□□ 0.5
Brf2Q3UAW9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Brf2Q3UAW9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brf2Q3UAW9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms