Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.26■□□□□ 0.51
Mmp25Q3U435 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp25Q3U435 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp25Q3U435 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp25Q3U435 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp25Q3U435 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp25Q3U435 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.25■□□□□ 0.51
Mmp25Q3U435 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.25■□□□□ 0.51
Mmp25Q3U435 Gm10493-201ENSMUST00000097270 612 ntBASIC18.25■□□□□ 0.51
Mmp25Q3U435 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp25Q3U435 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp25Q3U435 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp25Q3U435 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp25Q3U435 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp25Q3U435 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Mmp25Q3U435 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Mmp25Q3U435 Gm18284-201ENSMUST00000172604 624 ntBASIC18.24■□□□□ 0.51
Mmp25Q3U435 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.24■□□□□ 0.51
Mmp25Q3U435 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp25Q3U435 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp25Q3U435 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp25Q3U435 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp25Q3U435 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp25Q3U435 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp25Q3U435 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp25Q3U435 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.23■□□□□ 0.51
Mmp25Q3U435 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp25Q3U435 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Mmp25Q3U435 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp25Q3U435 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Mmp25Q3U435 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.23■□□□□ 0.51
Mmp25Q3U435 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp25Q3U435 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp25Q3U435 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp25Q3U435 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp25Q3U435 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp25Q3U435 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.21■□□□□ 0.51
Mmp25Q3U435 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp25Q3U435 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp25Q3U435 Gm5874-201ENSMUST00000096101 508 ntBASIC18.21■□□□□ 0.51
Mmp25Q3U435 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Mmp25Q3U435 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp25Q3U435 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Mmp25Q3U435 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.2■□□□□ 0.5
Mmp25Q3U435 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp25Q3U435 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Mmp25Q3U435 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp25Q3U435 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp25Q3U435 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.19■□□□□ 0.5
Mmp25Q3U435 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp25Q3U435 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp25Q3U435 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp25Q3U435 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp25Q3U435 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp25Q3U435 Gm8495-201ENSMUST00000188740 694 ntBASIC18.19■□□□□ 0.5
Mmp25Q3U435 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.19■□□□□ 0.5
Mmp25Q3U435 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.19■□□□□ 0.5
Mmp25Q3U435 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.19■□□□□ 0.5
Mmp25Q3U435 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp25Q3U435 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp25Q3U435 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp25Q3U435 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp25Q3U435 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Mmp25Q3U435 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp25Q3U435 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp25Q3U435 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp25Q3U435 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.18■□□□□ 0.5
Mmp25Q3U435 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.18■□□□□ 0.5
Mmp25Q3U435 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.18■□□□□ 0.5
Mmp25Q3U435 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp25Q3U435 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp25Q3U435 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp25Q3U435 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.17■□□□□ 0.5
Mmp25Q3U435 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp25Q3U435 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Gm9988-201ENSMUST00000069786 435 ntBASIC18.17■□□□□ 0.5
Mmp25Q3U435 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp25Q3U435 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp25Q3U435 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Mmp25Q3U435 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms