Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NrlP54846 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NrlP54846 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NrlP54846 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NrlP54846 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NrlP54846 Gm12441-201ENSMUST00000121806 588 ntBASIC20.65■□□□□ 0.9
NrlP54846 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.65■□□□□ 0.9
NrlP54846 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.65■□□□□ 0.9
NrlP54846 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NrlP54846 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NrlP54846 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.64■□□□□ 0.9
NrlP54846 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NrlP54846 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
NrlP54846 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NrlP54846 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NrlP54846 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NrlP54846 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NrlP54846 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.64■□□□□ 0.89
NrlP54846 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.64■□□□□ 0.89
NrlP54846 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NrlP54846 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NrlP54846 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.64■□□□□ 0.89
NrlP54846 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NrlP54846 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NrlP54846 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NrlP54846 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NrlP54846 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NrlP54846 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.63■□□□□ 0.89
NrlP54846 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NrlP54846 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NrlP54846 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NrlP54846 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NrlP54846 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NrlP54846 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.62■□□□□ 0.89
NrlP54846 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NrlP54846 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NrlP54846 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NrlP54846 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NrlP54846 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.62■□□□□ 0.89
NrlP54846 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.62■□□□□ 0.89
NrlP54846 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NrlP54846 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NrlP54846 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NrlP54846 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NrlP54846 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NrlP54846 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
NrlP54846 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NrlP54846 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NrlP54846 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NrlP54846 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NrlP54846 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NrlP54846 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NrlP54846 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
NrlP54846 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NrlP54846 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NrlP54846 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
NrlP54846 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NrlP54846 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NrlP54846 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NrlP54846 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NrlP54846 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NrlP54846 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NrlP54846 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NrlP54846 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NrlP54846 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NrlP54846 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NrlP54846 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NrlP54846 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NrlP54846 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.57■□□□□ 0.88
NrlP54846 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.57■□□□□ 0.88
NrlP54846 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.57■□□□□ 0.88
NrlP54846 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NrlP54846 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NrlP54846 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NrlP54846 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NrlP54846 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NrlP54846 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NrlP54846 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NrlP54846 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms