Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm3P21107 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpm3P21107 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Tpm3P21107 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpm3P21107 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tpm3P21107 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tpm3P21107 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpm3P21107 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.67■■□□□ 1.06
Tpm3P21107 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.67■■□□□ 1.06
Tpm3P21107 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm3P21107 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm3P21107 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm3P21107 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm3P21107 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm3P21107 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm3P21107 Gm11175-201ENSMUST00000116172 543 ntBASIC21.66■■□□□ 1.06
Tpm3P21107 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.66■■□□□ 1.06
Tpm3P21107 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Tpm3P21107 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm3P21107 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm3P21107 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpm3P21107 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpm3P21107 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Tpm3P21107 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.65■■□□□ 1.06
Tpm3P21107 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Tpm3P21107 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tpm3P21107 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tpm3P21107 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.65■■□□□ 1.06
Tpm3P21107 Gm12366-201ENSMUST00000121722 873 ntBASIC21.65■■□□□ 1.06
Tpm3P21107 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.65■■□□□ 1.06
Tpm3P21107 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.65■■□□□ 1.06
Tpm3P21107 Gm5786-201ENSMUST00000085368 882 ntBASIC21.65■■□□□ 1.06
Tpm3P21107 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpm3P21107 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpm3P21107 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tpm3P21107 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tpm3P21107 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpm3P21107 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Tpm3P21107 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tpm3P21107 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tpm3P21107 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tpm3P21107 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tpm3P21107 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tpm3P21107 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
Tpm3P21107 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tpm3P21107 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tpm3P21107 Rarb-207ENSMUST00000225921 2756 ntBASIC21.64■■□□□ 1.05
Tpm3P21107 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.63■■□□□ 1.05
Tpm3P21107 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpm3P21107 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.63■■□□□ 1.05
Tpm3P21107 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Tpm3P21107 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpm3P21107 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Tpm3P21107 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tpm3P21107 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpm3P21107 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpm3P21107 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tpm3P21107 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpm3P21107 Grk6-206ENSMUST00000224995 2971 ntBASIC21.63■■□□□ 1.05
Tpm3P21107 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Tpm3P21107 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Tpm3P21107 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tpm3P21107 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpm3P21107 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpm3P21107 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpm3P21107 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tpm3P21107 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpm3P21107 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpm3P21107 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms