Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11236J3QMS7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.41■□□□□ 0.86
Gm11236J3QMS7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11236J3QMS7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11236J3QMS7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11236J3QMS7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.4■□□□□ 0.86
Gm11236J3QMS7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.4■□□□□ 0.86
Gm11236J3QMS7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm11236J3QMS7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Gm11236J3QMS7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.39■□□□□ 0.85
Gm11236J3QMS7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11236J3QMS7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.39■□□□□ 0.85
Gm11236J3QMS7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11236J3QMS7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11236J3QMS7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11236J3QMS7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 Gm6211-202ENSMUST00000167849 925 ntBASIC20.38■□□□□ 0.85
Gm11236J3QMS7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11236J3QMS7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Gm11236J3QMS7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Gm11236J3QMS7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Gm11236J3QMS7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11236J3QMS7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11236J3QMS7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11236J3QMS7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11236J3QMS7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11236J3QMS7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11236J3QMS7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11236J3QMS7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.36■□□□□ 0.85
Gm11236J3QMS7 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.36■□□□□ 0.85
Gm11236J3QMS7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11236J3QMS7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11236J3QMS7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11236J3QMS7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11236J3QMS7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11236J3QMS7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Gm10653-202ENSMUST00000139570 835 ntBASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Gm20760-201ENSMUST00000179197 648 ntBASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Gm5408-201ENSMUST00000197998 747 ntBASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11236J3QMS7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11236J3QMS7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11236J3QMS7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Gm11236J3QMS7 Gm12527-201ENSMUST00000117967 564 ntBASIC20.33■□□□□ 0.85
Gm11236J3QMS7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.33■□□□□ 0.85
Gm11236J3QMS7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Gm11236J3QMS7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Gm11236J3QMS7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11236J3QMS7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm11236J3QMS7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.33■□□□□ 0.84
Gm11236J3QMS7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm11236J3QMS7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11236J3QMS7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms