Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Herc1E9PZP8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.14□□□□□ -0.63
Herc1E9PZP8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Gm10571-201ENSMUST00000097869 1638 ntBASIC11.14□□□□□ -0.63
Herc1E9PZP8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Gm7153-201ENSMUST00000117092 455 ntBASIC11.14□□□□□ -0.63
Herc1E9PZP8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.14□□□□□ -0.63
Herc1E9PZP8 Gm37935-201ENSMUST00000192012 982 ntBASIC11.14□□□□□ -0.63
Herc1E9PZP8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc1E9PZP8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC11.13□□□□□ -0.63
Herc1E9PZP8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc1E9PZP8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Gm6206-201ENSMUST00000133472 2199 ntBASIC11.13□□□□□ -0.63
Herc1E9PZP8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Herc1E9PZP8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Gm2399-201ENSMUST00000104944 225 ntBASIC11.12□□□□□ -0.63
Herc1E9PZP8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.12□□□□□ -0.63
Herc1E9PZP8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Herc1E9PZP8 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.11□□□□□ -0.63
Herc1E9PZP8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc1E9PZP8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Herc1E9PZP8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Gm17661-201ENSMUST00000170317 270 ntBASIC11.1□□□□□ -0.63
Herc1E9PZP8 Gm5186-201ENSMUST00000218781 920 ntBASIC11.1□□□□□ -0.63
Herc1E9PZP8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Herc1E9PZP8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.09□□□□□ -0.63
Herc1E9PZP8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Herc1E9PZP8 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.09□□□□□ -0.63
Herc1E9PZP8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms