Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav17A0A075B655 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav17A0A075B655 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav17A0A075B655 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav17A0A075B655 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav17A0A075B655 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav17A0A075B655 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.34■□□□□ 0.05
Trav17A0A075B655 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.34■□□□□ 0.05
Trav17A0A075B655 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav17A0A075B655 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Trav17A0A075B655 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav17A0A075B655 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav17A0A075B655 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav17A0A075B655 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav17A0A075B655 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav17A0A075B655 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav17A0A075B655 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav17A0A075B655 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav17A0A075B655 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav17A0A075B655 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav17A0A075B655 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav17A0A075B655 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav17A0A075B655 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav17A0A075B655 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav17A0A075B655 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav17A0A075B655 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav17A0A075B655 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
Trav17A0A075B655 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trav17A0A075B655 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.32■□□□□ 0.04
Trav17A0A075B655 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav17A0A075B655 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms