Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5538W4VSP6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5538W4VSP6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5538W4VSP6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5538W4VSP6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5538W4VSP6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5538W4VSP6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.9■□□□□ 0.78
Gm5538W4VSP6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm5538W4VSP6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm5538W4VSP6 Smad6-203ENSMUST00000179458 273 ntBASIC19.89■□□□□ 0.77
Gm5538W4VSP6 Gm43017-201ENSMUST00000198296 752 ntBASIC19.89■□□□□ 0.77
Gm5538W4VSP6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.89■□□□□ 0.77
Gm5538W4VSP6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gm5538W4VSP6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Gm5538W4VSP6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm5538W4VSP6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.89■□□□□ 0.77
Gm5538W4VSP6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm5538W4VSP6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm5538W4VSP6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Gm5538W4VSP6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm5538W4VSP6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm5538W4VSP6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm5538W4VSP6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm5538W4VSP6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm5538W4VSP6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm5538W4VSP6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.87■□□□□ 0.77
Gm5538W4VSP6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5538W4VSP6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5538W4VSP6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5538W4VSP6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Gm5538W4VSP6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5538W4VSP6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Gm5538W4VSP6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5538W4VSP6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5538W4VSP6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.84■□□□□ 0.77
Gm5538W4VSP6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Gm5538W4VSP6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm5538W4VSP6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.83■□□□□ 0.77
Gm5538W4VSP6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5538W4VSP6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5538W4VSP6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5538W4VSP6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Gm5538W4VSP6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5538W4VSP6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5538W4VSP6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Gm5538W4VSP6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.76
Gm5538W4VSP6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5538W4VSP6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5538W4VSP6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5538W4VSP6 Gm40848-201ENSMUST00000221998 324 ntBASIC19.81■□□□□ 0.76
Gm5538W4VSP6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms