Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scube3Q66PY1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scube3Q66PY1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scube3Q66PY1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scube3Q66PY1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scube3Q66PY1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Scube3Q66PY1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Scube3Q66PY1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube3Q66PY1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.45■□□□□ 0.86
Scube3Q66PY1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube3Q66PY1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.45■□□□□ 0.86
Scube3Q66PY1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube3Q66PY1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube3Q66PY1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.45■□□□□ 0.86
Scube3Q66PY1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scube3Q66PY1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.44■□□□□ 0.86
Scube3Q66PY1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scube3Q66PY1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.43■□□□□ 0.86
Scube3Q66PY1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scube3Q66PY1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scube3Q66PY1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube3Q66PY1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scube3Q66PY1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube3Q66PY1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube3Q66PY1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scube3Q66PY1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scube3Q66PY1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube3Q66PY1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube3Q66PY1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scube3Q66PY1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scube3Q66PY1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scube3Q66PY1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scube3Q66PY1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scube3Q66PY1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scube3Q66PY1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scube3Q66PY1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scube3Q66PY1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scube3Q66PY1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Scube3Q66PY1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Scube3Q66PY1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scube3Q66PY1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.39■□□□□ 0.85
Scube3Q66PY1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scube3Q66PY1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scube3Q66PY1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Scube3Q66PY1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Gm27801-201ENSMUST00000184174 223 ntBASIC20.38■□□□□ 0.85
Scube3Q66PY1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube3Q66PY1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube3Q66PY1 Gm8495-201ENSMUST00000188740 694 ntBASIC20.37■□□□□ 0.85
Scube3Q66PY1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms