Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Znf235Q61116 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Znf235Q61116 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Znf235Q61116 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Znf235Q61116 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.55■□□□□ 0.88
Znf235Q61116 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.55■□□□□ 0.88
Znf235Q61116 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Znf235Q61116 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Znf235Q61116 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Znf235Q61116 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Znf235Q61116 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Znf235Q61116 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.54■□□□□ 0.88
Znf235Q61116 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.54■□□□□ 0.88
Znf235Q61116 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Znf235Q61116 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Znf235Q61116 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Znf235Q61116 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.53■□□□□ 0.88
Znf235Q61116 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Znf235Q61116 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Znf235Q61116 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Znf235Q61116 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.53■□□□□ 0.88
Znf235Q61116 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Znf235Q61116 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Znf235Q61116 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Znf235Q61116 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Znf235Q61116 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.53■□□□□ 0.88
Znf235Q61116 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Znf235Q61116 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Znf235Q61116 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Znf235Q61116 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Znf235Q61116 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Znf235Q61116 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Znf235Q61116 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Znf235Q61116 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Znf235Q61116 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Znf235Q61116 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Znf235Q61116 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Znf235Q61116 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Znf235Q61116 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.51■□□□□ 0.87
Znf235Q61116 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.51■□□□□ 0.87
Znf235Q61116 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.51■□□□□ 0.87
Znf235Q61116 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.51■□□□□ 0.87
Znf235Q61116 Gm7514-201ENSMUST00000209475 934 ntBASIC20.51■□□□□ 0.87
Znf235Q61116 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Znf235Q61116 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Znf235Q61116 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Znf235Q61116 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Znf235Q61116 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Znf235Q61116 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.5■□□□□ 0.87
Znf235Q61116 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.5■□□□□ 0.87
Znf235Q61116 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Znf235Q61116 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Znf235Q61116 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf235Q61116 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf235Q61116 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Znf235Q61116 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.49■□□□□ 0.87
Znf235Q61116 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf235Q61116 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf235Q61116 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf235Q61116 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf235Q61116 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf235Q61116 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Znf235Q61116 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Znf235Q61116 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Znf235Q61116 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Znf235Q61116 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Znf235Q61116 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.48■□□□□ 0.87
Znf235Q61116 Gm13534-201ENSMUST00000121169 513 ntBASIC20.48■□□□□ 0.87
Znf235Q61116 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Znf235Q61116 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Znf235Q61116 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Znf235Q61116 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Znf235Q61116 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Znf235Q61116 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Znf235Q61116 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Znf235Q61116 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Znf235Q61116 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.47■□□□□ 0.87
Znf235Q61116 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Znf235Q61116 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Znf235Q61116 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Znf235Q61116 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Znf235Q61116 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Znf235Q61116 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.47■□□□□ 0.87
Znf235Q61116 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Znf235Q61116 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Znf235Q61116 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Znf235Q61116 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Znf235Q61116 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Znf235Q61116 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Znf235Q61116 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Znf235Q61116 Gm7860-201ENSMUST00000121190 879 ntBASIC20.46■□□□□ 0.87
Znf235Q61116 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.46■□□□□ 0.87
Znf235Q61116 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.46■□□□□ 0.87
Znf235Q61116 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.46■□□□□ 0.87
Znf235Q61116 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Znf235Q61116 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Znf235Q61116 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Znf235Q61116 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Znf235Q61116 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.45■□□□□ 0.86
Znf235Q61116 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms