Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Cacna1aP97445 Gm5408-201ENSMUST00000197998 747 ntBASIC18.02■□□□□ 0.47
Cacna1aP97445 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.02■□□□□ 0.47
Cacna1aP97445 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cacna1aP97445 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1aP97445 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cacna1aP97445 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.01■□□□□ 0.47
Cacna1aP97445 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.01■□□□□ 0.47
Cacna1aP97445 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1aP97445 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1aP97445 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1aP97445 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1aP97445 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1aP97445 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cacna1aP97445 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Cacna1aP97445 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1aP97445 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1aP97445 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cacna1aP97445 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18■□□□□ 0.47
Cacna1aP97445 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cacna1aP97445 AC122769.4-201ENSMUST00000228166 901 ntBASIC18■□□□□ 0.47
Cacna1aP97445 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Cacna1aP97445 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cacna1aP97445 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1aP97445 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1aP97445 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1aP97445 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1aP97445 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1aP97445 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1aP97445 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1aP97445 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.98■□□□□ 0.47
Cacna1aP97445 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1aP97445 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1aP97445 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1aP97445 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.98■□□□□ 0.47
Cacna1aP97445 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1aP97445 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1aP97445 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1aP97445 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1aP97445 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1aP97445 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1aP97445 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1aP97445 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Cacna1aP97445 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1aP97445 Gm38205-201ENSMUST00000192243 258 ntBASIC17.97■□□□□ 0.47
Cacna1aP97445 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1aP97445 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.97■□□□□ 0.47
Cacna1aP97445 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1aP97445 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1aP97445 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cacna1aP97445 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.96■□□□□ 0.47
Cacna1aP97445 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.96■□□□□ 0.47
Cacna1aP97445 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cacna1aP97445 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1aP97445 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1aP97445 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1aP97445 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1aP97445 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1aP97445 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cacna1aP97445 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cacna1aP97445 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cacna1aP97445 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.95■□□□□ 0.46
Cacna1aP97445 Gm6420-201ENSMUST00000193885 723 ntBASIC17.95■□□□□ 0.46
Cacna1aP97445 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1aP97445 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.95■□□□□ 0.46
Cacna1aP97445 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.95■□□□□ 0.46
Cacna1aP97445 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.95■□□□□ 0.46
Cacna1aP97445 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1aP97445 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cacna1aP97445 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacna1aP97445 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1aP97445 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1aP97445 Gm715-201ENSMUST00000117865 831 ntBASIC17.94■□□□□ 0.46
Cacna1aP97445 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cacna1aP97445 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1aP97445 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cacna1aP97445 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.94■□□□□ 0.46
Cacna1aP97445 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1aP97445 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1aP97445 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1aP97445 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1aP97445 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.93■□□□□ 0.46
Cacna1aP97445 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.93■□□□□ 0.46
Cacna1aP97445 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cacna1aP97445 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1aP97445 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1aP97445 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cacna1aP97445 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cacna1aP97445 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1aP97445 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cacna1aP97445 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.93■□□□□ 0.46
Cacna1aP97445 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1aP97445 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1aP97445 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
Cacna1aP97445 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1aP97445 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1aP97445 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1aP97445 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.92■□□□□ 0.46
Cacna1aP97445 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1aP97445 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms