Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxd8P23463 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxd8P23463 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.3■□□□□ 0.84
Hoxd8P23463 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxd8P23463 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxd8P23463 Gm13148-201ENSMUST00000118892 745 ntBASIC20.3■□□□□ 0.84
Hoxd8P23463 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hoxd8P23463 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxd8P23463 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Hoxd8P23463 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxd8P23463 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxd8P23463 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxd8P23463 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxd8P23463 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.29■□□□□ 0.84
Hoxd8P23463 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.29■□□□□ 0.84
Hoxd8P23463 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.29■□□□□ 0.84
Hoxd8P23463 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hoxd8P23463 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxd8P23463 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxd8P23463 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxd8P23463 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxd8P23463 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.28■□□□□ 0.84
Hoxd8P23463 Gm7860-201ENSMUST00000121190 879 ntBASIC20.28■□□□□ 0.84
Hoxd8P23463 Gm6420-201ENSMUST00000193885 723 ntBASIC20.28■□□□□ 0.84
Hoxd8P23463 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxd8P23463 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxd8P23463 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxd8P23463 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxd8P23463 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Hoxd8P23463 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.27■□□□□ 0.84
Hoxd8P23463 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.27■□□□□ 0.84
Hoxd8P23463 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxd8P23463 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.26■□□□□ 0.83
Hoxd8P23463 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxd8P23463 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.26■□□□□ 0.83
Hoxd8P23463 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxd8P23463 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxd8P23463 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
Hoxd8P23463 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxd8P23463 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxd8P23463 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxd8P23463 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.25■□□□□ 0.83
Hoxd8P23463 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxd8P23463 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxd8P23463 Gm6365-201ENSMUST00000054711 744 ntBASIC20.25■□□□□ 0.83
Hoxd8P23463 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hoxd8P23463 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxd8P23463 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxd8P23463 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.25■□□□□ 0.83
Hoxd8P23463 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxd8P23463 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxd8P23463 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Hoxd8P23463 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Hoxd8P23463 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxd8P23463 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxd8P23463 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxd8P23463 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hoxd8P23463 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.23■□□□□ 0.83
Hoxd8P23463 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.23■□□□□ 0.83
Hoxd8P23463 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.23■□□□□ 0.83
Hoxd8P23463 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.23■□□□□ 0.83
Hoxd8P23463 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.23■□□□□ 0.83
Hoxd8P23463 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxd8P23463 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.23■□□□□ 0.83
Hoxd8P23463 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxd8P23463 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.23■□□□□ 0.83
Hoxd8P23463 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hoxd8P23463 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxd8P23463 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxd8P23463 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.22■□□□□ 0.83
Hoxd8P23463 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Hoxd8P23463 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxd8P23463 Nespas-201ENSMUST00000143738 1083 ntBASIC20.22■□□□□ 0.83
Hoxd8P23463 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.22■□□□□ 0.83
Hoxd8P23463 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxd8P23463 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxd8P23463 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxd8P23463 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hoxd8P23463 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hoxd8P23463 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxd8P23463 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxd8P23463 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Hoxd8P23463 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hoxd8P23463 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.21■□□□□ 0.83
Hoxd8P23463 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.21■□□□□ 0.83
Hoxd8P23463 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxd8P23463 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.21■□□□□ 0.83
Hoxd8P23463 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxd8P23463 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms