Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tpm3P21107 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tpm3P21107 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Tpm3P21107 Gm10420-201ENSMUST00000121713 882 ntBASIC21.77■■□□□ 1.08
Tpm3P21107 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tpm3P21107 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.77■■□□□ 1.08
Tpm3P21107 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tpm3P21107 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tpm3P21107 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tpm3P21107 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tpm3P21107 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tpm3P21107 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tpm3P21107 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tpm3P21107 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Tpm3P21107 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.76■■□□□ 1.07
Tpm3P21107 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tpm3P21107 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tpm3P21107 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tpm3P21107 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tpm3P21107 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Tpm3P21107 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Tpm3P21107 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.75■■□□□ 1.07
Tpm3P21107 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tpm3P21107 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Tpm3P21107 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.75■■□□□ 1.07
Tpm3P21107 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tpm3P21107 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.75■■□□□ 1.07
Tpm3P21107 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.75■■□□□ 1.07
Tpm3P21107 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Tpm3P21107 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tpm3P21107 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tpm3P21107 BC021767-201ENSMUST00000126387 1716 ntBASIC21.75■■□□□ 1.07
Tpm3P21107 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tpm3P21107 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Tpm3P21107 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm3P21107 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm3P21107 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.74■■□□□ 1.07
Tpm3P21107 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm3P21107 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Tpm3P21107 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.74■■□□□ 1.07
Tpm3P21107 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.74■■□□□ 1.07
Tpm3P21107 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm3P21107 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Tpm3P21107 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Tpm3P21107 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm3P21107 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm3P21107 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm3P21107 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm3P21107 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm3P21107 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Tpm3P21107 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Tpm3P21107 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Tpm3P21107 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Tpm3P21107 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.73■■□□□ 1.07
Tpm3P21107 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Tpm3P21107 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.73■■□□□ 1.07
Tpm3P21107 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm3P21107 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm3P21107 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm3P21107 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm3P21107 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm3P21107 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm3P21107 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm3P21107 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.72■■□□□ 1.07
Tpm3P21107 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Tpm3P21107 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm3P21107 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Tpm3P21107 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm3P21107 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Tpm3P21107 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm3P21107 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.71■■□□□ 1.07
Tpm3P21107 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm3P21107 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm3P21107 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm3P21107 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm3P21107 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm3P21107 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm3P21107 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.71■■□□□ 1.07
Tpm3P21107 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm3P21107 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Tpm3P21107 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Tpm3P21107 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Tpm3P21107 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.7■■□□□ 1.06
Tpm3P21107 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm3P21107 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm3P21107 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm3P21107 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Tpm3P21107 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm3P21107 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Tpm3P21107 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms