Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BckdkO55028 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.99■□□□□ 0.47
BckdkO55028 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
BckdkO55028 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BckdkO55028 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BckdkO55028 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BckdkO55028 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BckdkO55028 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
BckdkO55028 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BckdkO55028 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.98■□□□□ 0.47
BckdkO55028 Gm12251-201ENSMUST00000117893 792 ntBASIC17.98■□□□□ 0.47
BckdkO55028 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.98■□□□□ 0.47
BckdkO55028 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BckdkO55028 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BckdkO55028 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BckdkO55028 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
BckdkO55028 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
BckdkO55028 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BckdkO55028 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BckdkO55028 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.97■□□□□ 0.47
BckdkO55028 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.97■□□□□ 0.47
BckdkO55028 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.97■□□□□ 0.47
BckdkO55028 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BckdkO55028 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BckdkO55028 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BckdkO55028 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
BckdkO55028 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
BckdkO55028 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BckdkO55028 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BckdkO55028 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BckdkO55028 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.96■□□□□ 0.47
BckdkO55028 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BckdkO55028 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
BckdkO55028 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
BckdkO55028 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BckdkO55028 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BckdkO55028 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BckdkO55028 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
BckdkO55028 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
BckdkO55028 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
BckdkO55028 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
BckdkO55028 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
BckdkO55028 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BckdkO55028 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BckdkO55028 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BckdkO55028 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BckdkO55028 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BckdkO55028 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.95■□□□□ 0.46
BckdkO55028 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BckdkO55028 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BckdkO55028 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BckdkO55028 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BckdkO55028 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BckdkO55028 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BckdkO55028 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BckdkO55028 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.94■□□□□ 0.46
BckdkO55028 Gm26833-201ENSMUST00000180899 440 ntBASIC17.94■□□□□ 0.46
BckdkO55028 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.94■□□□□ 0.46
BckdkO55028 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BckdkO55028 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BckdkO55028 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BckdkO55028 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BckdkO55028 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.94■□□□□ 0.46
BckdkO55028 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BckdkO55028 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BckdkO55028 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BckdkO55028 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
BckdkO55028 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BckdkO55028 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BckdkO55028 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BckdkO55028 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BckdkO55028 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.93■□□□□ 0.46
BckdkO55028 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.93■□□□□ 0.46
BckdkO55028 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.93■□□□□ 0.46
BckdkO55028 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BckdkO55028 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
BckdkO55028 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BckdkO55028 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BckdkO55028 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BckdkO55028 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BckdkO55028 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.93■□□□□ 0.46
BckdkO55028 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BckdkO55028 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
BckdkO55028 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BckdkO55028 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BckdkO55028 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BckdkO55028 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BckdkO55028 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.92■□□□□ 0.46
BckdkO55028 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BckdkO55028 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BckdkO55028 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms