Protein–RNA interactions for Protein: E0CX42

Gm4491, Predicted gene 4491, mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4491E0CX42 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm4491E0CX42 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Gm4491E0CX42 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm4491E0CX42 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm4491E0CX42 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Gm4491E0CX42 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Gm4491E0CX42 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm4491E0CX42 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Gm6802-201ENSMUST00000167843 1983 ntBASIC10.57□□□□□ -0.72
Gm4491E0CX42 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Gm7143-201ENSMUST00000222811 859 ntBASIC10.57□□□□□ -0.72
Gm4491E0CX42 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm4491E0CX42 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Gm43566-201ENSMUST00000196851 808 ntBASIC10.56□□□□□ -0.72
Gm4491E0CX42 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC10.56□□□□□ -0.72
Gm4491E0CX42 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Gm10232-201ENSMUST00000089221 720 ntBASIC10.56□□□□□ -0.72
Gm4491E0CX42 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Gm4491E0CX42 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC10.55□□□□□ -0.72
Gm4491E0CX42 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC10.55□□□□□ -0.72
Gm4491E0CX42 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm4491E0CX42 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm4491E0CX42 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Gm4491E0CX42 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm4491E0CX42 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Gm4491E0CX42 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms