Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc78D3Z5T1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc78D3Z5T1 AA386476-201ENSMUST00000098781 1665 ntBASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Gm9988-201ENSMUST00000069786 435 ntBASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc78D3Z5T1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.85■■□□□ 1.09
Ccdc78D3Z5T1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ccdc78D3Z5T1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Ccdc78D3Z5T1 Gm27801-201ENSMUST00000184174 223 ntBASIC21.85■■□□□ 1.09
Ccdc78D3Z5T1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc78D3Z5T1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc78D3Z5T1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ccdc78D3Z5T1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc78D3Z5T1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc78D3Z5T1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc78D3Z5T1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc78D3Z5T1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.84■■□□□ 1.09
Ccdc78D3Z5T1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc78D3Z5T1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc78D3Z5T1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc78D3Z5T1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Ccdc78D3Z5T1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc78D3Z5T1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc78D3Z5T1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc78D3Z5T1 Gm42569-201ENSMUST00000200539 472 ntBASIC21.83■■□□□ 1.09
Ccdc78D3Z5T1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc78D3Z5T1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Ccdc78D3Z5T1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc78D3Z5T1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc78D3Z5T1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc78D3Z5T1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc78D3Z5T1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc78D3Z5T1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc78D3Z5T1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.82■■□□□ 1.08
Ccdc78D3Z5T1 Gm42778-201ENSMUST00000199644 553 ntBASIC21.82■■□□□ 1.08
Ccdc78D3Z5T1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc78D3Z5T1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc78D3Z5T1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Gm18671-201ENSMUST00000214826 683 ntBASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc78D3Z5T1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc78D3Z5T1 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.79■■□□□ 1.08
Ccdc78D3Z5T1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc78D3Z5T1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc78D3Z5T1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc78D3Z5T1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc78D3Z5T1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc78D3Z5T1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.78■■□□□ 1.08
Ccdc78D3Z5T1 Gm10033-202ENSMUST00000211874 928 ntBASIC21.78■■□□□ 1.08
Ccdc78D3Z5T1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Ccdc78D3Z5T1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc78D3Z5T1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc78D3Z5T1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc78D3Z5T1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc78D3Z5T1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc78D3Z5T1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.77■■□□□ 1.08
Ccdc78D3Z5T1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc78D3Z5T1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ccdc78D3Z5T1 Reep4-203ENSMUST00000226563 1444 ntBASIC21.77■■□□□ 1.08
Ccdc78D3Z5T1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc78D3Z5T1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc78D3Z5T1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ccdc78D3Z5T1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms