Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.45□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Gm43530-201ENSMUST00000195920 274 ntBASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.42□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-23A0A0A6YVW3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Gm7417-201ENSMUST00000192950 473 ntBASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-23A0A0A6YVW3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms