Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8n-2A0A075B633 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Gm12527-201ENSMUST00000117967 564 ntBASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Gm13534-201ENSMUST00000121169 513 ntBASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8n-2A0A075B633 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Gm6211-202ENSMUST00000167849 925 ntBASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8n-2A0A075B633 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 AA386476-201ENSMUST00000098781 1665 ntBASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8n-2A0A075B633 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Trav8n-2A0A075B633 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav8n-2A0A075B633 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav8n-2A0A075B633 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav8n-2A0A075B633 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.83■□□□□ 0.44
Trav8n-2A0A075B633 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav8n-2A0A075B633 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav8n-2A0A075B633 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav8n-2A0A075B633 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav8n-2A0A075B633 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav8n-2A0A075B633 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav8n-2A0A075B633 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trav8n-2A0A075B633 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.82■□□□□ 0.44
Trav8n-2A0A075B633 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.81■□□□□ 0.44
Trav8n-2A0A075B633 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms