Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav6n-5A0A075B621 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6n-5A0A075B621 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6n-5A0A075B621 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6n-5A0A075B621 Grk6-206ENSMUST00000224995 2971 ntBASIC15.05■□□□□ 0
Trav6n-5A0A075B621 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-5A0A075B621 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Trav6n-5A0A075B621 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Gm14523-201ENSMUST00000117260 558 ntBASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.03■□□□□ -0
Trav6n-5A0A075B621 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-5A0A075B621 Rarb-207ENSMUST00000225921 2756 ntBASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6n-5A0A075B621 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-5A0A075B621 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-5A0A075B621 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-5A0A075B621 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6n-5A0A075B621 Gm45640-201ENSMUST00000210665 1896 ntBASIC15□□□□□ -0.01
Trav6n-5A0A075B621 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-5A0A075B621 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15□□□□□ -0.01
Trav6n-5A0A075B621 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms