Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mbd3l1Q9D9H3 Gm9397-201ENSMUST00000200125 605 ntBASIC16.96■□□□□ 0.31
Mbd3l1Q9D9H3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Mbd3l1Q9D9H3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mbd3l1Q9D9H3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mbd3l1Q9D9H3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.96■□□□□ 0.31
Mbd3l1Q9D9H3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mbd3l1Q9D9H3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.95■□□□□ 0.3
Mbd3l1Q9D9H3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mbd3l1Q9D9H3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mbd3l1Q9D9H3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mbd3l1Q9D9H3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mbd3l1Q9D9H3 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.94■□□□□ 0.3
Mbd3l1Q9D9H3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mbd3l1Q9D9H3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mbd3l1Q9D9H3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mbd3l1Q9D9H3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Mbd3l1Q9D9H3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.93■□□□□ 0.3
Mbd3l1Q9D9H3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mbd3l1Q9D9H3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mbd3l1Q9D9H3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Mbd3l1Q9D9H3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mbd3l1Q9D9H3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mbd3l1Q9D9H3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mbd3l1Q9D9H3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mbd3l1Q9D9H3 Fst-202ENSMUST00000223640 2612 ntBASIC16.9■□□□□ 0.3
Mbd3l1Q9D9H3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mbd3l1Q9D9H3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Mbd3l1Q9D9H3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.89■□□□□ 0.3
Mbd3l1Q9D9H3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mbd3l1Q9D9H3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mbd3l1Q9D9H3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms