Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q8VDP2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q8VDP2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Q8VDP2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q8VDP2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q8VDP2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.95■□□□□ 0.62
Q8VDP2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q8VDP2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q8VDP2 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.95■□□□□ 0.62
Q8VDP2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q8VDP2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Q8VDP2 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.94■□□□□ 0.62
Q8VDP2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.94■□□□□ 0.62
Q8VDP2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q8VDP2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.93■□□□□ 0.62
Q8VDP2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q8VDP2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q8VDP2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q8VDP2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q8VDP2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q8VDP2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Q8VDP2 Mir3960-201ENSMUST00000198213 73 ntBASIC18.93■□□□□ 0.62
Q8VDP2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Q8VDP2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Q8VDP2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.93■□□□□ 0.62
Q8VDP2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Q8VDP2 Gm11687-201ENSMUST00000118911 886 ntBASIC18.92■□□□□ 0.62
Q8VDP2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.92■□□□□ 0.62
Q8VDP2 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.92■□□□□ 0.62
Q8VDP2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.92■□□□□ 0.62
Q8VDP2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8VDP2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Gm37136-201ENSMUST00000194368 194 ntBASIC18.91■□□□□ 0.62
Q8VDP2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.91■□□□□ 0.62
Q8VDP2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Q8VDP2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8VDP2 Cap2-205ENSMUST00000225824 1634 ntBASIC18.9■□□□□ 0.62
Q8VDP2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Q8VDP2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Q8VDP2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q8VDP2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Q8VDP2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Q8VDP2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Q8VDP2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.89■□□□□ 0.61
Q8VDP2 Scarna2-201ENSMUST00000157560 414 ntBASIC18.89■□□□□ 0.61
Q8VDP2 Gm9806-201ENSMUST00000051080 552 ntBASIC18.89■□□□□ 0.61
Q8VDP2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Q8VDP2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms