Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.29■■□□□ 1
Upb1Q8VC97 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.29■■□□□ 1
Upb1Q8VC97 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.29■■□□□ 1
Upb1Q8VC97 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Gm9988-201ENSMUST00000069786 435 ntBASIC21.29■■□□□ 1
Upb1Q8VC97 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.28■■□□□ 1
Upb1Q8VC97 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Upb1Q8VC97 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.28■■□□□ 1
Upb1Q8VC97 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Upb1Q8VC97 Gm18671-201ENSMUST00000214826 683 ntBASIC21.28■■□□□ 1
Upb1Q8VC97 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Upb1Q8VC97 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Upb1Q8VC97 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.28■■□□□ 1
Upb1Q8VC97 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Upb1Q8VC97 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.27■■□□□ 1
Upb1Q8VC97 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Upb1Q8VC97 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Upb1Q8VC97 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Upb1Q8VC97 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.27■■□□□ 1
Upb1Q8VC97 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.27■■□□□ 1
Upb1Q8VC97 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Upb1Q8VC97 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Upb1Q8VC97 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.26■□□□□ 0.99
Upb1Q8VC97 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upb1Q8VC97 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Upb1Q8VC97 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Upb1Q8VC97 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Upb1Q8VC97 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Upb1Q8VC97 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Upb1Q8VC97 Gm26571-201ENSMUST00000181399 666 ntBASIC21.24■□□□□ 0.99
Upb1Q8VC97 Gm42569-201ENSMUST00000200539 472 ntBASIC21.24■□□□□ 0.99
Upb1Q8VC97 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Upb1Q8VC97 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Upb1Q8VC97 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Upb1Q8VC97 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Upb1Q8VC97 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Upb1Q8VC97 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Upb1Q8VC97 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upb1Q8VC97 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Upb1Q8VC97 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upb1Q8VC97 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Upb1Q8VC97 Gm10849-201ENSMUST00000100397 618 ntBASIC21.23■□□□□ 0.99
Upb1Q8VC97 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Upb1Q8VC97 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Upb1Q8VC97 Gm10033-202ENSMUST00000211874 928 ntBASIC21.23■□□□□ 0.99
Upb1Q8VC97 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upb1Q8VC97 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.23■□□□□ 0.99
Upb1Q8VC97 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Upb1Q8VC97 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upb1Q8VC97 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Upb1Q8VC97 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.22■□□□□ 0.99
Upb1Q8VC97 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Upb1Q8VC97 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Upb1Q8VC97 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.22■□□□□ 0.99
Upb1Q8VC97 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Upb1Q8VC97 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upb1Q8VC97 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.21■□□□□ 0.99
Upb1Q8VC97 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.21■□□□□ 0.99
Upb1Q8VC97 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upb1Q8VC97 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Upb1Q8VC97 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.21■□□□□ 0.99
Upb1Q8VC97 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upb1Q8VC97 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upb1Q8VC97 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.21■□□□□ 0.99
Upb1Q8VC97 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Upb1Q8VC97 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Upb1Q8VC97 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upb1Q8VC97 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upb1Q8VC97 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Upb1Q8VC97 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Upb1Q8VC97 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Upb1Q8VC97 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upb1Q8VC97 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upb1Q8VC97 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upb1Q8VC97 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upb1Q8VC97 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms