Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afjQ8R1M2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afjQ8R1M2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
H2afjQ8R1M2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afjQ8R1M2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
H2afjQ8R1M2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afjQ8R1M2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afjQ8R1M2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
H2afjQ8R1M2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
H2afjQ8R1M2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.07■□□□□ 0.48
H2afjQ8R1M2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afjQ8R1M2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Gm9959-201ENSMUST00000068277 390 ntBASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
H2afjQ8R1M2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afjQ8R1M2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
H2afjQ8R1M2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.04■□□□□ 0.48
H2afjQ8R1M2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
H2afjQ8R1M2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.04■□□□□ 0.48
H2afjQ8R1M2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afjQ8R1M2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afjQ8R1M2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
H2afjQ8R1M2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
H2afjQ8R1M2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afjQ8R1M2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
H2afjQ8R1M2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 764.3 ms