Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim63Q38HM4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim63Q38HM4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim63Q38HM4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim63Q38HM4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.24■□□□□ 0.19
Trim63Q38HM4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.24■□□□□ 0.19
Trim63Q38HM4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim63Q38HM4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim63Q38HM4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim63Q38HM4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Gm37136-201ENSMUST00000194368 194 ntBASIC16.22■□□□□ 0.19
Trim63Q38HM4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim63Q38HM4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim63Q38HM4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim63Q38HM4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim63Q38HM4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim63Q38HM4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim63Q38HM4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.21■□□□□ 0.19
Trim63Q38HM4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.21■□□□□ 0.19
Trim63Q38HM4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim63Q38HM4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim63Q38HM4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim63Q38HM4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim63Q38HM4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim63Q38HM4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim63Q38HM4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim63Q38HM4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim63Q38HM4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim63Q38HM4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim63Q38HM4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim63Q38HM4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim63Q38HM4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim63Q38HM4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.2■□□□□ 0.18
Trim63Q38HM4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim63Q38HM4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim63Q38HM4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim63Q38HM4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim63Q38HM4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim63Q38HM4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.19■□□□□ 0.18
Trim63Q38HM4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim63Q38HM4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim63Q38HM4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms