Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Mir6236-201ENSMUST00000184437 123 ntBASIC18.1■□□□□ 0.49
Cacna1aP97445 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Cacna1aP97445 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1aP97445 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1aP97445 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.09■□□□□ 0.49
Cacna1aP97445 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.09■□□□□ 0.49
Cacna1aP97445 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.09■□□□□ 0.49
Cacna1aP97445 Gm26524-201ENSMUST00000192339 390 ntBASIC18.09■□□□□ 0.49
Cacna1aP97445 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.09■□□□□ 0.49
Cacna1aP97445 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1aP97445 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1aP97445 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.09■□□□□ 0.49
Cacna1aP97445 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cacna1aP97445 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cacna1aP97445 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cacna1aP97445 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cacna1aP97445 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cacna1aP97445 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1aP97445 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.08■□□□□ 0.48
Cacna1aP97445 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1aP97445 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1aP97445 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1aP97445 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1aP97445 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1aP97445 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1aP97445 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1aP97445 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1aP97445 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1aP97445 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.06■□□□□ 0.48
Cacna1aP97445 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1aP97445 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1aP97445 Gm6365-201ENSMUST00000054711 744 ntBASIC18.06■□□□□ 0.48
Cacna1aP97445 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1aP97445 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1aP97445 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1aP97445 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1aP97445 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1aP97445 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1aP97445 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.05■□□□□ 0.48
Cacna1aP97445 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.05■□□□□ 0.48
Cacna1aP97445 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.05■□□□□ 0.48
Cacna1aP97445 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1aP97445 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1aP97445 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1aP97445 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1aP97445 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1aP97445 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.05■□□□□ 0.48
Cacna1aP97445 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1aP97445 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1aP97445 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1aP97445 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1aP97445 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cacna1aP97445 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Cacna1aP97445 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.04■□□□□ 0.48
Cacna1aP97445 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cacna1aP97445 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1aP97445 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Cacna1aP97445 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Gm13534-201ENSMUST00000121169 513 ntBASIC18.03■□□□□ 0.48
Cacna1aP97445 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.03■□□□□ 0.48
Cacna1aP97445 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.03■□□□□ 0.48
Cacna1aP97445 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.03■□□□□ 0.48
Cacna1aP97445 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cacna1aP97445 Gm10819-201ENSMUST00000099988 561 ntBASIC18.03■□□□□ 0.48
Cacna1aP97445 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.03■□□□□ 0.48
Cacna1aP97445 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1aP97445 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cacna1aP97445 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cacna1aP97445 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cacna1aP97445 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cacna1aP97445 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.02■□□□□ 0.48
Cacna1aP97445 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cacna1aP97445 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cacna1aP97445 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cacna1aP97445 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cacna1aP97445 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cacna1aP97445 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cacna1aP97445 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms